Analyze data

Follow this procedure to process your single molecule videos (SMVs) or trajectories and characterize the molecule dynamics in your sample.

Note: Skip step 1 if already in possession of intensity-time traces (ASCII files or in a mash project).

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Step 3: Identify state network

In this step, the sample’s most sufficient state configuration is identified and state transition rates are estimated from transitions detected in single molecule traces.

Note: Alternatively, if states are sufficiently separated, the most sufficient state configuration can be identified from histogram data; see Workflow for more information.

In construction

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