Index A | C | F | M | P | R | S | U | W A add2ff() (fretlabel.ff.Parameters method) append() (fretlabel.ff.Parameters method) C change_type() (fretlabel.ff.Molecule method) check_charge() (in module fretlabel.ff) F fretlabel.ff module M module fretlabel.ff Molecule (class in fretlabel.ff) P pandasMol2_replace() (in module fretlabel.ff) Parameters (class in fretlabel.ff) pymol_couple_dye2baselinker() (in module fretlabel.ff) pymol_save_molecule() (in module fretlabel.ff) pymol_savemol2() (in module fretlabel.ff) R read_amberdyes() (fretlabel.ff.Parameters class method) read_ff() (fretlabel.ff.Parameters class method) read_frcmod() (fretlabel.ff.Parameters class method) read_molecule() (fretlabel.ff.Molecule class method) read_specialbond() (fretlabel.ff.Parameters class method) remove_atom() (fretlabel.ff.Molecule method) S save_rtp() (fretlabel.ff.Molecule method) U update_dye_library() (in module fretlabel.ff) update_residuetypes() (in module fretlabel.ff) update_specbond() (in module fretlabel.ff) update_valency() (in module fretlabel.ff) W write_atp() (fretlabel.ff.Parameters method) write_mol2() (in module fretlabel.ff) write_rtp() (in module fretlabel.ff)