repository open issue

Index

A

add2ff() (fretlabel.ff.Parameters method)

append() (fretlabel.ff.Parameters method)

C

change_type() (fretlabel.ff.Molecule method)

check_charge() (in module fretlabel.ff)

F

fretlabel.ff module

M

module fretlabel.ff

Molecule (class in fretlabel.ff)

P

pandasMol2_replace() (in module fretlabel.ff) Parameters (class in fretlabel.ff)

pymol_couple_dye2baselinker() (in module fretlabel.ff) pymol_save_molecule() (in module fretlabel.ff) pymol_savemol2() (in module fretlabel.ff)

R

read_amberdyes() (fretlabel.ff.Parameters class method) read_ff() (fretlabel.ff.Parameters class method) read_frcmod() (fretlabel.ff.Parameters class method)

read_molecule() (fretlabel.ff.Molecule class method) read_specialbond() (fretlabel.ff.Parameters class method) remove_atom() (fretlabel.ff.Molecule method)

S

save_rtp() (fretlabel.ff.Molecule method)

U

update_dye_library() (in module fretlabel.ff) update_residuetypes() (in module fretlabel.ff)

update_specbond() (in module fretlabel.ff) update_valency() (in module fretlabel.ff)

W

write_atp() (fretlabel.ff.Parameters method)

write_mol2() (in module fretlabel.ff) write_rtp() (in module fretlabel.ff)